Methyl 2,6-difluorobenzoate is primarily used as an intermediate in the synthesis of various pharmaceuticals and agrochemicals. Its structure, featuring fluorine atoms, makes it valuable in the development of compounds with enhanced biological activity and stability. In the pharmaceutical industry, it is employed in the production of active pharmaceutical ingredients (APIs) for drugs targeting specific diseases, particularly those requiring fluorinated compounds for improved efficacy. In agrochemicals, it serves as a building block for the creation of pesticides and herbicides, where the fluorine atoms contribute to the effectiveness and durability of the final product. Additionally, it is utilized in organic synthesis for the preparation of complex molecules in research and development settings.